FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008003

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008003
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences404711
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT1356.08341E-736.6269537
CACGTCT1450.001425789124.3578269
ACACGTC1700.00359276520.7757938
GTTACGA2507.140457E-519.8300041
AGAGCAC3053.3372347E-416.2119313
GAGCACA3509.4862207E-414.127544
AGCACAC3000.00558067414.1275395
GAAGAGC5400.001977604610.4920651
AAGAGCA5650.00293640510.004272
TGAACAG6700.00112197569.4886465
CAGTCAC1950.00403216857.24489167
CGAGAAC3650.0069591765.1942143105-109
Produced by FastQC (version 0.11.5)