FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008006

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008006
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences499490
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAAAA6951.2047753E-410.3091351
CTCATTT5800.0032519529.882551
CCTTCAT7150.00178490259.0186911
GACATTT7500.0028748528.5573563
CAACAAA8900.00142870868.0503921
GAAAGAA14951.7222428E-67.66806551
CTTCTTT16205.7279594E-67.0763941
Produced by FastQC (version 0.11.5)