FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008012

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008012
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1750386
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCCGAT10206.191649E-47.7501211
CCCAAAA17502.9516377E-77.39180371
CTTGGAT10250.00554591467.0111961
GTTTGAG12900.00100413356.6850941
CTCGCGG11900.00317132176.6429611
CATAGAT13500.00167931216.38797861
CTCCGAT14150.00284796426.09453771
GTTCAAC13050.008289876.05756571
CTTCCAA18202.0850141E-45.92291931
CTTTTCT39709.731593E-105.43058631
CACAGAA19450.00307016545.1727851
Produced by FastQC (version 0.11.5)