FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008022

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008022
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences763520
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCCAGG4101.6647755E-414.084931
CATACAT7050.00153056289.173493
CGCCGTT9200.00184318647.84622431
CTTAAAA12000.00329830946.6169831
CTTTGAA12000.00329830946.6169831
CTTTCAT12600.0054904546.3018891
AAAGATT18100.001232875.56070472
Produced by FastQC (version 0.11.5)