FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008031

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008031
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences956303
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTGGAT6505.718115E-511.0970481
CTCGGGA4750.00801101610.6298051
CAACCGT7400.0022990078.7726671
AAGATCC8050.00513040378.0267843
TGCAACA10500.00707091956.8369167
TCAAAAC12700.0062829516.2210782
AAGAACT14850.0049249985.8016263
AAAGATT22601.9613146E-55.72058872
CAAAAAC19100.0023313085.2870751
Produced by FastQC (version 0.11.5)