FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008034

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008034
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1841180
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTAAGAT12000.00363029356.55785661
CTTTTGA24454.544563E-86.43715951
CTTCGAG15952.6087504E-46.2793951
CTTCGAT17701.5159343E-46.0627331
TTCGATT16955.9460284E-45.88981532
CTATGAC15150.00640250145.6665551
CTTTTAA24109.733922E-65.6401031
CATAAAC19505.647384E-45.5030961
Produced by FastQC (version 0.11.5)