FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008035

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008035
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences986835
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACTAGAG800.00245766634.8878061
ATCGTAT10150.0068513249.029025145
CTTCGGT10006.860638E-47.67531731
ATTCAAG9450.00340887867.36981966
CTTTGTT11805.0826423E-47.0958251
TGGAACG10550.0098938026.6030752
CAATATT12950.00149375636.45389844
CTTGTTT12250.00583494876.2655651
CAAAAAA19105.96815E-45.47976061
Produced by FastQC (version 0.11.5)