FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008036

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008036
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences725094
Sequences flagged as poor quality0
Sequence length100-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAACTT950.00590043629.1719511
CTCCAAT4450.006652705410.898511
CCATTAT4450.006652705410.898511
TTCGAAA6508.8923094E-510.6243752
AATCCAC6250.0082730498.8242425
CTGAAAC7350.00311227478.483681
CTTTCAT7800.00531802937.9942371
TTTATTT8850.0019786567.78976063
TTCTGAT8100.00779959567.65993179
ATTCTGC9957.390067E-47.62143956
TCAATAT8250.0091888187.52065943
CCTTGAT10750.00159488427.0894631
CTTGCAG12100.00552043136.29848961
CTTTGCC16254.995064E-45.969031
CTTTTCC17900.00170864375.41881231
Produced by FastQC (version 0.11.5)