FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008037

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008037
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences913508
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT2702.9467628E-1028.2099197
AGCACAC4653.8016879E-1019.3581265
ACACGTC4306.328446E-817.7132058
CACGTCT4551.2061537E-716.7399529
GCACACG5801.8809951E-613.1322036
GAGCACA7059.321229E-812.7688254
AGAGCAC6557.3278297E-611.6285163
AAACGTG5950.005330269.309925
GAAGAGC12056.894989E-46.9087581
AAGAGCA12550.00111737496.62152432
AGTCACT3100.00186552625.806929620-24
Produced by FastQC (version 0.11.5)