FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008045

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008045
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences458895
Sequences flagged as poor quality0
Sequence length100-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT1450.001248974224.9185187
CACGTCT2053.7439074E-421.150359
CCCCCGT2000.007934218.1152761
CTACGGA2700.002337152416.1024671
AGAGCAC3100.005966021713.9865243
TCCGATA4900.00990495410.32788852
ACGTCTG2550.00615276.234515710-14
Produced by FastQC (version 0.11.5)