FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008058

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008058
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences409463
Sequences flagged as poor quality0
Sequence length100-151
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCAGTTG2900.00382495614.9544938
CCAATCT3507.9720706E-414.4560093
CTCTGTT4704.4400612E-412.5403781
CTTTCAT7950.00362245448.3405341
CTTTTAA9250.00158591037.9648341
GATTTTG10356.7729206E-47.68193675
Produced by FastQC (version 0.11.5)