FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008066

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008066
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1072630
Sequences flagged as poor quality0
Sequence length100-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTGGAA8004.7443164E-48.9975761
CTTTAAA11101.7572827E-47.7816871
TGATTTG11500.00225083376.86262464
GTTTCAG11700.0026073966.76740741
CAACAAC16254.2765845E-56.64436341
CTTTTCT18652.840004E-45.78932481
CGAAAAA22359.8011296E-55.47503471
AAAGGAA18050.007353495.16920382
Produced by FastQC (version 0.11.5)