FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008078

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008078
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1115
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTGGCCAGTTCCCTGATTTCCGCTTTGGTATAACTGCCGAGCGGCAGCA20.17937219730941703No Hit
GGCAGGCGTAGCCACACCACCAGCGGCGAAGTTCACCACAGGCAGTTTGC20.17937219730941703No Hit
GTGGCCGTGGGCGCCGACATGCCTGCCTACGAACGTGGCGACAAAGTCGT20.17937219730941703No Hit
TATAATAGTAATGATTTCAGATGTGAGGGGAAAGTACCCGGTGTATTATT20.17937219730941703No Hit
ACAAGCTGCTACCGTCCGGGGCGGAGCATCGGCTGCGTCATTGTGAAGGA20.17937219730941703No Hit
GCAATGCGTATCATCAAAGGTATCGTGGCAGTACCGGAAGTAGGTGAAGT20.17937219730941703No Hit
ATTGAAATATTTTATTCCACTATTTATTGGATTAGCTGCTGTTTGGCCAT20.17937219730941703No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)