FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008079

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008079
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1642519
Sequences flagged as poor quality0
Sequence length100-151
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGAAT11550.00257472936.77603441
GTTTATT12800.00752644336.11431171
AATATTC20253.0987245E-55.90676365
CCAAAAA17509.1940566E-45.69186831
CTTTCAT20450.00114915095.21870571
AAATATT21755.3242885E-45.18142754
Produced by FastQC (version 0.11.5)