FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008080

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008080
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1039601
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAAAAT13052.6708403E-78.6744061
ATTTCGA8150.00653850057.8129531
CTCCACG10300.00675890136.8689931
CCAAAAT13753.3749285E-46.68915031
ATTCCGG14300.0038105195.93711571
CTTTTAT21153.3574493E-45.35229351
Produced by FastQC (version 0.11.5)