FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008088

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008088
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences653534
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACTGCCA5800.006774218810.871088145
CCAACAC4700.00727647710.7675831
CAAGCAT6700.0099006488.6324341
CTTTCAT9000.0014611088.0329591
CTTTTAT12350.00438198966.4393761
Produced by FastQC (version 0.11.5)