FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008089

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008089
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1430256
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTTGGAC7900.00460402348.1245098
GTGACAT8200.00580621327.91750431
GAGCCGT9500.00284872867.50685648
GTCTGCT15400.00105409886.08950851
CAGAAAC21200.00228396555.7080755145
CTCCAGA15400.0069954745.62108471
TCAAAAC16550.00282422245.60728172
AACATTC17500.0055200145.29769565
AAATCAC18900.0023591445.2826035
CTTTTGG17800.00589021955.2684511
GGGAAAT19300.00265672435.23275471
TTTAATT23452.2858084E-45.17503262
GTTGGAA18350.0084068385.11054131
Produced by FastQC (version 0.11.5)