FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008090

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008090
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1427044
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGAAT4151.8535079E-413.909451
TCTAATC4806.4575137E-411.9984822
AGATTGG11252.0572745E-47.6768766
CAACGAT15652.4501589E-56.915841
CTTCGGA12500.00508273446.34966371
CATTCAG14600.00386047765.93056961
Produced by FastQC (version 0.11.5)