FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008093

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008093
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences855826
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTAACGC2500.001717570616.8643933
GTTCGCT4350.00497502611.3327311
GTTTTAA8650.0012805698.1415991
CTTCAAC9700.0039439367.2602911
CTTTAAA11550.00286278456.7071261
CAATTTT12900.00126083986.55114651
CCTCTTT12900.00905504456.00521761
TTATATC14200.00384069375.93261536
Produced by FastQC (version 0.11.5)