FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008105

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008105
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences749099
Sequences flagged as poor quality0
Sequence length100-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAAAT4907.922536E-411.7084441
TAAAAGC8400.0053472599.305082145
TCAGATT6250.0065227879.083752
CTTTGAT9904.8296562E-58.6926321
GATAATC10200.0059656556.9575292
CGAAAAT10500.0078975436.7587433
CTGCAAA14800.00479970275.81466631
Produced by FastQC (version 0.11.5)