FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008106

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008106
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences480406
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGAGT1709.9798395E-525.7080691
TAACCCC1751.2917245E-424.750029
GTGAGTA2003.1893724E-421.658522
ATAACCC3351.3669123E-619.3936718
GTCTCTT2600.001754166216.8091221
GTATAAC4502.2638698E-514.43751056
TATAACC5901.4232373E-613.4586957
AAGAGTT6250.00565836359.2409694
CTTCAAT9101.5585677E-48.8047781
TACCCCC2056.1550585E-47.754705435-39
CTTTAAT12505.990606E-46.9925951
CAAAAAG11800.00250986456.79012541
Produced by FastQC (version 0.11.5)