FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008107

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008107
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences449573
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCCCC750.001384992713.44139625-29
CTCCAAT3800.001502628413.2929581
CGAGAAT3300.00910614313.1203221
GTCGGGG2050.0040640967.239086135-139
ATCTATA3400.00338048355.523185100-104
Produced by FastQC (version 0.11.5)