FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008125

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008125
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1527532
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGTAA6406.1484316E-410.1354421
GTATTAC10850.0095784916.6258275
CTCCAAC12000.0033573586.60680681
CAAGAAT20352.3102219E-56.0209451
CTTTACC21304.6407924E-55.75240561
CTTGAAG18000.00111561625.60577541
CTTTTGT23252.9278253E-55.57994271
CCTCCAT17450.0047135945.36942861
TCAATTT19250.00267639945.2297492
Produced by FastQC (version 0.11.5)