FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008133

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008133
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1015668
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCTATT6650.0091249598.7198361
GATGCGA6650.00929206058.700529
CTTTAAT12400.0044551016.4300011
CGATGAA15650.00791925.55785131
CACAAAA15850.0091071835.48772051
AATTTTC17500.0046602385.37415845
CTTTTAT19650.0031297355.1642291
Produced by FastQC (version 0.11.5)