FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008140

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008140
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences946828
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAGGG4201.3011922E-515.3118961
CTTCGGT9250.00214955567.72492071
AAACTGC14455.7899824E-46.39864875
CAAATAT15550.0090889795.4886263
CTTTTTT38701.8704668E-85.1699081
CAAAGAT18400.0096812715.0484871
Produced by FastQC (version 0.11.5)