FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008156

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008156
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences448749
Sequences flagged as poor quality0
Sequence length100-151
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGGTCC1100.00986291926.2547789
CTTACTT4200.002759404212.2602271
CTATAAG4400.003908647711.7029451
ATTAGAT4850.0080707910.6171041
ATCAATC6150.00494132479.3940472
CTTTATT11251.5897033E-47.84654571
CAAAAAG8800.0091456317.52332161
Produced by FastQC (version 0.11.5)