FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008162

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008162
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1501179
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACCAAT13101.6756323E-57.739361
TAAAGCG8650.0092786017.5135147
CTAAAAT15258.9416193E-46.17336231
CGGAAGT14400.00328072816.0177697
CAAATTC21402.9634256E-45.40001873
CTTTCAT24456.0399587E-55.33140851
Produced by FastQC (version 0.11.5)