FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008186

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008186
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1720900
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTACTCC9854.0446444E-58.8267961
CTCCGAT14100.0024981786.1662371
CTCCAAT15309.250009E-46.15616131
CCCAAAA15359.620786E-46.13610841
CTTCCGA15900.0094817865.4681721
CTTTCAC19800.0034642425.1229591
Produced by FastQC (version 0.11.5)