FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008188

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008188
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences434409
Sequences flagged as poor quality0
Sequence length100-151
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCAGGG1600.002241702322.5355457
CTTCGTT3350.00883670513.1799171
CTCCATT4906.369985E-412.0143471
CTTAAAT5500.001674997710.7036911
TTCAGCT6507.0479745E-49.9826829
Produced by FastQC (version 0.11.5)