FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008216

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008216
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences842468
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGCCTA3559.2321815E-414.1812972
CCAAAAC8500.0080763267.6304021
AAAGGCG10750.0087469446.68779754
CATAAAT13200.0012603226.55135541
ATATTGT14907.363177E-46.27261546
TATTGTT13050.0082432336.06001577
Produced by FastQC (version 0.11.5)