FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008219

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008219
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences775487
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGCG4550.00576544111.1104215
ATCCCAG4550.00576544111.1104216
GATTCAC4850.00897946410.4670491
CTTTAAT8350.00650662567.81670951
CCCCCCC2251.9800002E-47.70322615-19
ATTTGAT10300.0053145867.04094081
Produced by FastQC (version 0.11.5)