FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008224

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008224
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences632044
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTTGGG2800.002848123215.6334851
CCCTCGG4500.004920384411.3487511
CTGATAT7151.338056E-410.2036721
CTTTCAT9903.7934788E-69.5801151
CAAAGAA12951.297127E-57.8871631
CTTCATT8500.0072301037.72478061
CTTCGGG8800.0098563387.4614361
GATAGTA3350.00291769676.4522465
Produced by FastQC (version 0.11.5)