FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008244

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008244
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences851048
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCTGAG2650.002537175515.9077971
CCCGAAC4550.00707418610.8091431
CCCATAT5903.670403E-410.7175411
TTAATTG8951.9892737E-59.3732033
CTGGAGA6150.0062047069.1394391
CTACAAA7300.0025786228.6621221
TGGAAGT9350.00295967357.4768413
GTATAAT10300.00722698456.82130431
GAATTTA14250.00418511735.88702874
AATTTAT19900.00101000925.26855375
Produced by FastQC (version 0.11.5)