FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008253

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008253
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences637895
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT1850.006166911718.9253397
CACGTCT2601.053952E-418.8525499
GCACACG3303.370653E-516.9821116
AAAAAGT13750.00274264166.11355973
Produced by FastQC (version 0.11.5)