FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008256

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008256
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1108873
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATTCAAT12851.1847936E-47.28464656
CCACAAA13501.7202634E-47.0674881
CTTCTAC10500.00570856556.9898231
CTTAAAA11750.00222268586.87084771
CTCATAA10750.0071700246.8272691
CTCGAAA10750.0071700246.8272691
CTTGAAA19559.395055E-66.38201241
CATAAAT14500.0029551666.07391551
CTGAAGA13300.0081076756.070111
CTTTGAT17300.00343450555.5150921
CAGGAAA25601.7405231E-55.44714741
CAAAAAG25107.391149E-55.26325371
Produced by FastQC (version 0.11.5)