FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008259

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008259
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2472871
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCGGGG17950.00117846816.591393145
CCCAAGG15701.921446E-46.42965841
CCCACCT14907.126215E-46.29095551
CCCCGCT20702.9854042E-55.9215871
GTTAAAG16100.00180737145.82206441
CCCTCAT16550.00250977535.66376071
ATATAGG17250.00432981745.4086566
TCAATAC22657.237083E-45.07006173
CCCATCT20100.0044387015.0221711
Produced by FastQC (version 0.11.5)