FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008262

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008262
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1208913
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTGAGTT6003.3201874E-410.8351881
CTCCAAG9753.7144528E-58.890411
GTTCTAT11703.0993667E-47.40867571
CGCTTCT13200.00122848746.566781
GTTAAAA13350.00139597176.49299671
CTCAAAA17208.944791E-56.29952761
GTTTGAT12900.00696940956.15953831
CAACATT15600.00121063056.0195491
CTTTAAA21803.8452054E-45.30162051
GCCAGCA18300.0083860335.1114687
Produced by FastQC (version 0.11.5)