FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008263

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008263
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1504272
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AATTTAG10800.00113912997.3193185
CTTTAAT20654.1731564E-66.29584261
GTTTGAT18403.3512497E-56.2806361
GTTTAAT13950.00229418656.21310141
GTTCCGC16904.8571394E-45.98332741
CCCATTT16050.00170485375.8501871
Produced by FastQC (version 0.11.5)