FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008270

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008270
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences566971
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAAAT3801.1509546E-414.7085581
TTTGGCC3100.007806558613.4305588
CTCCGAT5050.001268144211.0678261
TCCGATT4700.009841084510.3375962
CCTTTAT6155.6623074E-410.2242421
CTTCTTT14105.32678E-46.4415141
Produced by FastQC (version 0.11.5)