FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008283

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008283
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1338261
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATTTAGT6550.0082991418.8218396
CTTGGAA13954.584839E-67.7892381
CTCCGTT13451.9311813E-47.00162741
GTTTGAA15651.733232E-46.4802481
GTTTCAA17758.755195E-45.71357061
CAAAAAG31203.9797033E-65.10794261
Produced by FastQC (version 0.11.5)