FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008290

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008290
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1988341
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACCCTG8650.0095249667.49171265
GCACACG9750.00334466927.38499266
AGCACAC10800.00111605397.3337095
CTCCCAA10750.0083078976.72456651
CTCCGAA15000.00511030855.78312731
CCAAGAT17000.00334528145.52798941
CCACAAG18600.0096092455.0524631
Produced by FastQC (version 0.11.5)