FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008293

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008293
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences558963
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTTAAA2900.00401188914.8489181
CTCCGAC3100.00624560713.8909241
CTTCCGA4806.61544E-411.961631
GATTGTC4600.006727522710.8814285
ACCTTTT8150.005916427.8992534
Produced by FastQC (version 0.11.5)