FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008302

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008302
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences649132
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACTGAC3400.00307615815.453249145
CCCAAAT4250.00350221411.8774621
CTTAAAA8205.951373E-48.794291
GTTCCAG10005.0884006E-58.653581
CTTTAAT8700.0098744427.4599831
AAGATTT12205.224745E-47.07778453
CAAAGAT10250.00535235137.0354311
AAAGATT13050.00111719266.6208642
Produced by FastQC (version 0.11.5)