FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008310

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008310
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences655552
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCTAA850.002894453733.741372
CTCTAAT3103.280193E-416.2511651
CCCAGAC4250.003554922811.8537911
CTCCAAT5650.002523755410.1903651
CTCTTAT6300.0062040979.1389771
CACCGAT7350.00220426338.8125861
GTTTCAA9550.00273757177.5360681
CTTCATT10500.00689303136.85423331
CTTTTAT15400.00108112426.07534271
GAAGAAC13050.00846929856.04371263
CTTTTTA15500.00116858126.0361471
Produced by FastQC (version 0.11.5)