FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008312

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008312
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1863376
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT6406.6172826E-410.055017
ACACGTC6750.00107829919.5336398
AGCACAC9854.613905E-69.43685155
GCACACG9854.613905E-69.43685156
CACGTCT7000.00150309959.1931529
GAGCACA10156.19989E-47.7492254
CCCGAAT15450.0075852795.58022981
ATCGAAT15750.0093736945.47394041
ATTCAAC17200.00413004775.43018051
CTCATTT17750.00597958645.26192141
Produced by FastQC (version 0.11.5)