FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008323

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008323
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2293504
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TACCCGT9151.8115365E-48.6870699
GTTCGGG9200.00177590677.87742761
CACGACC11051.5435297E-47.87029841
CGAATGT12506.377537E-46.9573431
CTCAGGA13852.753679E-46.80245731
GGTCAAC15000.0049696585.7977861
CTCAGAA15000.0049696585.7977861
ATTCAAG19750.00334743185.1372791
CGATTAT21450.00169735565.0679951
ATTTACG20100.0043202465.03307776
Produced by FastQC (version 0.11.5)