FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008328

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008328
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences726554
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCTCGTA3650.001156782513.763925
CTCAGCA4750.00799919510.6313581
CGACGAA4750.00831229410.5764875
CTTCAAT12550.005300456.32314731
CTCTTTT17557.969271E-45.7548661
Produced by FastQC (version 0.11.5)