FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008332

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008332
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences545681
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT1650.003243049621.1477097
AACGCTA1950.00852252617.8925744
CTTGAAT5601.7040164E-512.4895121
GGGCCCT1400.0089796228.737868115-119
AATATTG7850.0052773068.0003745
AAGATTT9550.00370005687.30691583
CAAAAAG12050.0047864346.384681
Produced by FastQC (version 0.11.5)