FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008333

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008333
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences619411
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT2252.8324852E-522.361317
CACGTCT2404.6598896E-520.9637289
ACACGTC3001.1899789E-519.1668368
CCCGGGA3300.00919012813.1032051
AGAGCAC4453.4536188E-412.9214633
GCACACG4150.003003502312.1236016
AGCACAC4400.004650910411.434765
ATCAAAT7401.8180795E-510.7127561
GAGCACA4800.008882510.4818644
ATTGGAA7100.00158892519.1353341
TCAAACT6350.00667762159.0573922
GATCTCG7350.0022301868.8010995
CTTTCAG10450.00649426976.8964241
Produced by FastQC (version 0.11.5)