FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008342

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008342
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences416734
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTTTAT6256.7297084E-410.0327741
CTTCTGA7051.8443754E-49.882561
CAAAGAA9403.5762737E-48.1531111
CTTTTCT9000.00209908027.7413381
AAGAAAT10750.00160825887.0821723
Produced by FastQC (version 0.11.5)